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Documentation
Documentation
Getting Started
Motivation
Installation
Quick Overview
User Guide
Wrapper
Creating HDF files
Creating HDF Datasets
HDF5 and RDF: FAIR Attributes
Processing with HDF5 datasets
Group creation
Inspecting the File content
Natural Naming
Special I/O
Convention
Activate a Convention
Working with a Convention
Creating a convention
HDF5 and ontologies
Examples
EngMeta
Standard Name Convention
Interfaceing HDF5 files following the Standard Name Convention
Creating a convention using metadata4ing
Provenance
Layout
Getting Started with “Layouts”
Example Layouts
Database
First steps: HDF5 and databases
Using HDF5 file(s) as a database
HDF5 + mongoDB
Repository
Zenodo
Misc
Identifier
Extensions
Visualization
Working with time data
User directories
File properties
Query HDF metadata with SPARQL
Practical Examples
Visualize HDF5 in a knowledge graph
metadata4Ing
Example: Inspecting a NeXus file
Reading Photon-HDF5
HowTo
… change the package settings?
… access datasests inependent on its upper or lower case?
… slice a dataset based on a condition?
… add an affix-function to a standard name table during runtime?
… load a convention from a local YAML file?
How to work with torque data
Glossary
API Reference
h5rdmtoolbox.wrapper.core.File
h5rdmtoolbox.wrapper.core.Dataset
h5rdmtoolbox.wrapper.core.Group
h5rdmtoolbox.wrapper.core.Group.create_from_yaml
h5rdmtoolbox.layout.core.LayoutSpecification
h5rdmtoolbox.layout.core.Layout
h5rdmtoolbox.convention.StandardAttribute
h5rdmtoolbox.convention.StandardAttribute.get
h5rdmtoolbox.convention.StandardAttribute.set
h5rdmtoolbox.convention.standard_names.name.StandardName
h5rdmtoolbox.convention.standard_names.table.StandardNameTable
h5rdmtoolbox.convention.standard_names.table.StandardNameTable.from_web
h5rdmtoolbox.convention.standard_names.table.StandardNameTable.from_yaml
h5rdmtoolbox.convention.standard_names.table.StandardNameTable.from_xml
h5rdmtoolbox.convention.standard_names.table.StandardNameTable.from_zenodo
References
Repository
GitHub Repository
repository
open issue
Index
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C
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D
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F
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G
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L
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M
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R
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S
_
__init__() (h5rdmtoolbox.convention.standard_names.name.StandardName method)
(h5rdmtoolbox.convention.standard_names.table.StandardNameTable method)
(h5rdmtoolbox.convention.StandardAttribute method)
(h5rdmtoolbox.layout.core.Layout method)
(h5rdmtoolbox.layout.core.LayoutSpecification method)
(h5rdmtoolbox.wrapper.core.Dataset method)
(h5rdmtoolbox.wrapper.core.File method)
(h5rdmtoolbox.wrapper.core.Group method)
C
convention
create_from_yaml() (h5rdmtoolbox.wrapper.core.Group method)
D
database
Dataset (class in h5rdmtoolbox.wrapper.core)
F
File (class in h5rdmtoolbox.wrapper.core)
from_web() (h5rdmtoolbox.convention.standard_names.table.StandardNameTable static method)
from_xml() (h5rdmtoolbox.convention.standard_names.table.StandardNameTable static method)
from_yaml() (h5rdmtoolbox.convention.standard_names.table.StandardNameTable static method)
from_zenodo() (h5rdmtoolbox.convention.standard_names.table.StandardNameTable static method)
G
get() (h5rdmtoolbox.convention.StandardAttribute method)
Group (class in h5rdmtoolbox.wrapper.core)
L
layout
Layout (class in h5rdmtoolbox.layout.core)
LayoutSpecification (class in h5rdmtoolbox.layout.core)
M
metadata
R
repository
S
set() (h5rdmtoolbox.convention.StandardAttribute method)
standard attributes
StandardAttribute (class in h5rdmtoolbox.convention)
StandardName (class in h5rdmtoolbox.convention.standard_names.name)
StandardNameTable (class in h5rdmtoolbox.convention.standard_names.table)
