{
 "cells": [
  {
   "cell_type": "markdown",
   "id": "f98d567f-d2bf-4eb8-826a-6d71866ff6b5",
   "metadata": {},
   "source": [
    "# Reading Photon-HDF5\n",
    "\n",
    "Example files can be found [here](https://figshare.com/articles/dataset/Example_smFRET_data_files_in_Photon_HDF5_format/1456362)"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "d49231b4-de49-4452-b6eb-d0a4caa113cd",
   "metadata": {},
   "source": [
    "Download the file (might take a bit):"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "2d5bd197-9592-4503-a8ae-be6d2f3d6067",
   "metadata": {},
   "outputs": [],
   "source": [
    "import requests\n",
    "import pathlib\n",
    "\n",
    "if not pathlib.Path('test_photon_file.hdf5').exists():\n",
    "    r = requests.get('https://figshare.com/ndownloader/files/2182602')\n",
    "\n",
    "    with open('test_photon_file.hdf5', 'wb') as f:\n",
    "        f.write(r.content)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "4ae8dba2-a98a-4b6d-84c7-e180751d4bde",
   "metadata": {},
   "outputs": [],
   "source": [
    "import h5rdmtoolbox as h5tbx"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "0cb048fc-f741-4c18-81b9-797f06409fba",
   "metadata": {},
   "outputs": [],
   "source": [
    "h5tbx.dump('test_photon_file.hdf5', collapsed=False)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "e6b69070-6a9b-4155-b91c-28a75a18a15d",
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
 "metadata": {
  "kernelspec": {
   "display_name": "Python 3 (ipykernel)",
   "language": "python",
   "name": "python3"
  },
  "language_info": {
   "codemirror_mode": {
    "name": "ipython",
    "version": 3
   },
   "file_extension": ".py",
   "mimetype": "text/x-python",
   "name": "python",
   "nbconvert_exporter": "python",
   "pygments_lexer": "ipython3",
   "version": "3.8.18"
  }
 },
 "nbformat": 4,
 "nbformat_minor": 5
}